Genome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize
2011

Study of Auxin Response Factor Genes in Maize

publication Evidence: moderate

Author Information

Author(s): Xing Hongyan, Pudake Ramesh N, Guo Ganggang, Xing Guofang, Hu Zhaorong, Zhang Yirong, Sun Qixin, Ni Zhongfu

Primary Institution: China Agricultural University

Hypothesis

The maize ARF gene family has not been characterized in detail despite the release of the maize genome assembly.

Conclusion

The maize ARF gene family is expanded compared to Arabidopsis and rice, and their expression is regulated by auxin and small RNAs.

Supporting Evidence

  • 31 maize ARF genes were identified in the maize genome.
  • 14 of the identified genes have auxin-responsive elements in their promoter regions.
  • Dynamic expression patterns of ZmARF genes were observed during embryo development.

Takeaway

This study found that maize has more auxin response factor genes than some other plants, and these genes help control how the plant grows and develops.

Methodology

The study involved identifying maize ARF genes through genomic analysis, confirming sequences via RT-PCR, and analyzing expression patterns in response to auxin treatment.

Limitations

The study does not explore the functional roles of all identified ARF genes in detail.

Digital Object Identifier (DOI)

10.1186/1471-2164-12-178

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