Detection of North American orthopoxviruses by real time-PCR
2011

Detection of North American Orthopoxviruses Using Real-Time PCR

Sample size: 187 publication Evidence: high

Author Information

Author(s): Nadia F Gallardo-Romero, Andres Velasco-Villa, Sonja L Weiss, Ginny L Emerson, Darin S Carroll, Christine M Hughes, Yu Li, Kevin L Karem, Inger K Damon, Victoria A Olson

Primary Institution: Centers for Disease Control and Prevention

Hypothesis

The prevalence of North American orthopoxviruses in nature is unknown and may be more difficult to ascertain due to widespread use of vaccinia virus recombinant vaccines.

Conclusion

The developed real-time PCR assay is a highly sensitive and specific tool for detecting North American orthopoxviruses in animal tissues and bodily fluids.

Supporting Evidence

  • The assay showed more sensitivity than tissue culture tests.
  • The analytical sensitivity was 1.1 fg for Volepox virus DNA.
  • The assay did not cross-react with other orthopoxviruses.
  • The assay is capable of detecting low levels of NA OPXV DNA.

Takeaway

Scientists created a new test to find certain viruses in animals, which helps us understand how common these viruses are.

Methodology

A real-time PCR assay was developed to detect North American orthopoxvirus DNA in animal tissues and bodily fluids.

Limitations

The assay may not detect viable virus particles, only viral DNA remnants.

Participant Demographics

Samples were collected from various tissues and bodily fluids of infected and healthy Peromyscus californicus.

Statistical Information

P-Value

1.1 fg for VPXV DNA, 1.99 fg for SKPV DNA, 6.4 fg for RCNV DNA

Confidence Interval

95%

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1186/1743-422X-8-313

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