Genome Assembly of the Endangered Red-Wing Fish
Author Information
Author(s): Zhu Xiangyun, Luo Yanping, Ma Baoshan, Shen Qi, Zheng Xingyu, Xu Mei, Sheng Qiang, Wu Junjie
Primary Institution: Yangtze River Fisheries Research Institute, Chinese Academy of Fishery Sciences
Hypothesis
A high-quality genome assembly of Distoechodon macrophthalmus is essential for understanding its evolution and conservation.
Conclusion
This study provides essential genomic data for further research on the evolution and conservation of D. macrophthalmus.
Supporting Evidence
- The genome size is 1.01 Gb and N50 is 37.99 Mb.
- The assembled contigs were anchored into 24 chromosomes.
- BIOBUSCO analysis revealed that the genome assembly has 95.6% gene coverage completeness.
- A total of 30,424 protein-coding genes were identified in the genome.
Takeaway
Scientists studied a rare fish called the red-wing fish and created a detailed map of its DNA to help protect it and understand how it has changed over time.
Methodology
The genome was sequenced and assembled using the PacBio platform and Hi-C method.
Limitations
The study is based on a single individual, which may not represent the entire population's genetic diversity.
Participant Demographics
A female individual of D. macrophthalmus was collected from Chenghai Lake, Yunnan province.
Digital Object Identifier (DOI)
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