Development and application of the active surveillance of pathogens microarray to monitor bacterial gene flux
2008

Monitoring Bacterial Gene Flux with a Microarray

Sample size: 19 publication Evidence: high

Author Information

Author(s): Richard A Stabler, Lisa F Dawson, Petra C F Oyston, Richard W Titball, Jim Wade, Jason Hinds, Adam A Witney, Brendan W Wren

Primary Institution: London School of Hygiene and Tropical Medicine

Hypothesis

The Active Surveillance of Pathogens (ASP) microarray can effectively monitor bacterial gene flux and identify virulence-associated genes.

Conclusion

The ASP microarray has potential as a diagnostic tool and early warning system for pathogenic bacteria.

Supporting Evidence

  • The ASP microarray identified both known and unknown bacterial samples.
  • It provided information on antibiotic resistance and virulence determinants.
  • The microarray was validated with a range of bacterial pathogens.
  • Horizontal gene transfer was monitored using the ASP microarray.
  • The ASP microarray can identify potential bioterrorism threats.
  • Results showed the microarray's ability to detect gene acquisitions.
  • Clinical isolates were successfully distinguished using the microarray.
  • The ASP microarray can aid in rapid pathogen identification.

Takeaway

Scientists created a special test to check for bad germs in bacteria, which can help doctors know how to treat infections better.

Methodology

The ASP microarray was constructed with 4958 reporters from 151 bacterial species and validated with 19 bacterial pathogens.

Limitations

The presence of a gene reporter does not demonstrate that the gene is functional.

Digital Object Identifier (DOI)

10.1186/1471-2180-8-177

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