A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study
2007

Genetic Links to Kidney Function and Endocrine Traits

Sample size: 1345 publication Evidence: high

Author Information

Author(s): Hwang Shih-Jen, Yang Qiong, Meigs James B, Pearce Elizabeth N, Fox Caroline S

Primary Institution: National Heart Lung and Blood Institutes, Bethesda, MD, USA

Hypothesis

We tested for association between SNPs and measures of kidney function and endocrine traits.

Conclusion

Kidney function traits and TSH are associated with SNPs on the Affymetrix GeneChip Human Mapping 100K SNP set.

Supporting Evidence

  • The top SNPs associated with GFR, cysC, UAE, and TSH were identified with significant p-values.
  • Four SNPs in or near the CST3 gene were highly associated with cysC levels.
  • Genetic factors play a role in the progression of renal disease.

Takeaway

This study looked at how genes might affect kidney function and hormone levels in people. They found some strong links between certain genes and these health traits.

Methodology

Participants were genotyped for the Affymetrix GeneChip Human Mapping 100K SNP set, and associations were evaluated using generalized estimating equations and family-based association tests.

Potential Biases

The study's focus on multivariable models may have led to missing important bivariate associations.

Limitations

Kidney function was assessed by a single serum creatinine measure, which may lead to misclassification, and the sample was not ethnically diverse.

Participant Demographics

Participants were from the Framingham Heart Study, with a median eGFR of 53.7 ml/min/1.73 m2 among those with CKD.

Statistical Information

P-Value

1.6*10-05

Digital Object Identifier (DOI)

10.1186/1471-2350-8-S1-S10

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