SYTO dyes and EvaGreen outperform SYBR Green in real-time PCR
2011

Evaluating DNA Dyes for Real-Time PCR

publication Evidence: moderate

Author Information

Author(s): Anne C Eischeid

Primary Institution: U.S. Food and Drug Administration

Hypothesis

Can alternative DNA dyes outperform SYBR Green in real-time PCR?

Conclusion

EvaGreen and certain SYTO dyes are better alternatives to SYBR Green for real-time PCR.

Supporting Evidence

  • EvaGreen and certain SYTO dyes performed better than SYBR Green in terms of reaction efficiency.
  • High reaction efficiencies can be achieved using EvaGreen and SYTO dyes.
  • Empirical data were generated for 23 DNA dyes, highlighting the need for testing alternatives to SYBR Green.

Takeaway

This study tested different dyes used in a lab technique called PCR to see which ones work best. It found that some new dyes are better than the old favorite, SYBR Green.

Methodology

A panel of 23 DNA dyes was evaluated for performance in real-time PCR, focusing on reaction inhibition, melting temperature, fluorescent signal strength, and reaction efficiency.

Limitations

Limited structural information on dyes and variability in performance among dyes.

Digital Object Identifier (DOI)

10.1186/1756-0500-4-263

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