Characterisation of Genome-Wide PLZF/RARA Target Genes
2011

Study of PLZF/RARA Target Genes in Acute Promyelocytic Leukemia

publication Evidence: high

Author Information

Author(s): Spicuglia Salvatore, Vincent-Fabert Christelle, Benoukraf Touati, Tibéri Guillaume, Saurin Andrew J., Zacarias-Cabeza Joaquin, Grimwade David, Mills Ken, Calmels Boris, Bertucci François, Sieweke Michael, Ferrier Pierre, Duprez Estelle

Primary Institution: Centre d'Immunologie de Marseille-Luminy (CIML), Université de la Méditerranée, Marseille, France

Hypothesis

The PLZF/RARA fusion protein acts as an oncogenic transcriptional regulator in acute promyelocytic leukemia (APL).

Conclusion

The study identifies 413 specific PLZF/RARA target genes that are important for hematopoietic development and are significantly downregulated in primary PLZF/RARA APL cells.

Supporting Evidence

  • 413 specific PLZF/RARA target genes were identified.
  • 22 of these genes were significantly downregulated in primary PLZF/RARA APL cells.
  • PLZF/RARA binding was associated with increased H3K27me3 and decreased H3K9K14ac levels.

Takeaway

This study found that a protein involved in a type of leukemia can turn off important genes that help blood cells develop properly.

Methodology

The study used ChIP-on-chip analysis to identify PLZF/RARA target genes in a cell line expressing the fusion protein.

Limitations

The study primarily focuses on a specific cell line and may not fully represent the complexity of APL in patients.

Statistical Information

P-Value

4.99×10−9

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1371/journal.pone.0024176

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