Functional diversification of sonic hedgehog paralog enhancers identified by phylogenomic reconstruction
2007

Functional Diversification of Sonic Hedgehog Paralog Enhancers

publication Evidence: moderate

Author Information

Author(s): Yavor Hadzhiev, Michael Lang, Raymond Ertzer, Axel Meyer, Uwe Strähle, Ferenc Müller

Primary Institution: Institute of Toxicology and Genetics, Forschungszentrum Karlsruhe, Germany

Hypothesis

How do the sonic hedgehog paralog enhancers evolve and diversify in function across different vertebrate lineages?

Conclusion

The study suggests that specific motifs in the ar-C enhancer act as binary switches for enhancer activity in midline tissues, which are adjusted during the functional diversification of paralogs.

Supporting Evidence

  • The study identified lineage-specific motif changes in sonic hedgehog enhancers across vertebrates.
  • Transgenic analyses demonstrated the functional divergence of enhancers in different tissues.
  • Phylogenomic reconstruction provided insights into the evolutionary history of sonic hedgehog gene regulation.

Takeaway

Scientists studied how certain parts of genes change over time to help different animals develop. They found that these changes can make the genes work differently in different parts of the body.

Methodology

The study involved phylogenomic reconstruction and transgenic functional analyses to investigate enhancer activity and motif changes.

Limitations

The study primarily focuses on specific enhancers and may not encompass all regulatory elements involved in sonic hedgehog gene expression.

Digital Object Identifier (DOI)

10.1186/gb-2007-8-6-r106

Want to read the original?

Access the complete publication on the publisher's website

View Original Publication