Linkage Mapping and Comparative Genomics Using Next-Generation RAD Sequencing of a Non-Model Organism
2011

Mapping the Genome of the Diamondback Moth

Sample size: 24 publication 10 minutes Evidence: moderate

Author Information

Author(s): Baxter Simon W., Davey John W., Johnston J. Spencer, Shelton Anthony M., Heckel David G., Jiggins Chris D., Blaxter Mark L.

Primary Institution: Department of Zoology, University of Cambridge

Hypothesis

Can RAD sequencing be used to construct a genetic linkage map for the diamondback moth, Plutella xylostella?

Conclusion

RAD sequencing successfully identified genetic markers linked to spinosad resistance in the diamondback moth.

Supporting Evidence

  • RAD sequencing identified 3,177 maternally inherited RAD alleles linked to specific chromosomes.
  • The study constructed a genome-wide linkage map of 1,292 cM.
  • Genetic synteny was observed between P. xylostella and Bombyx mori chromosomes.
  • RAD sequencing provided a high density of molecular markers for mapping.
  • Resistance to spinosad was linked to a specific chromosomal region.

Takeaway

Scientists used a special DNA sequencing method to find genes in diamondback moths that help them resist a pesticide.

Methodology

RAD sequencing was used to construct a genetic linkage map from a backcross of spinosad-resistant and sensitive moths.

Limitations

The study was limited by the small sample size of 24 individuals, which may affect the robustness of the linkage map.

Participant Demographics

The study involved 24 diamondback moths, including both resistant and sensitive strains.

Digital Object Identifier (DOI)

10.1371/journal.pone.0019315

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