Crystal structure of alkyl hydroperoxidase D like protein PA0269 from Pseudomonas aeruginosa: Homology of the AhpD-like structural family
2011

Crystal Structure of a Protein from Pseudomonas aeruginosa

publication Evidence: moderate

Author Information

Author(s): Clarke Teresa E, Romanov Vladimir, Chirgadze Yuri N, Klomsiri Chananat, Kisselman Gera, Wu-Brown Jean, Poole Leslie B, Pai Emil F, Chirgadze Nickolay Y

Primary Institution: Campbell Cancer Research Institute, Ontario Cancer Institute, Princess Margaret Hospital, University Health Network, Toronto, Ontario, Canada

Hypothesis

What is the structure and potential function of the hypothetical protein PA0269 from Pseudomonas aeruginosa?

Conclusion

The protein PA0269 is likely a weak hydroperoxidase with peroxidase-related activity.

Supporting Evidence

  • The protein has an all-helical fold with a chain topology similar to a known AhpD from Mycobacterium tuberculosis.
  • A conserved two α-helical motif responsible for function is present in both proteins.
  • PA0269 exhibits a weak ability to reduce H2O2 as tested using a ferrous oxidation-xylenol orange (FOX) assay.

Takeaway

Scientists studied a protein from bacteria that helps protect against harmful substances, and they found it might work like a similar protein in another bacteria.

Methodology

The crystal structure of PA0269 was determined using X-ray crystallography.

Limitations

The binding sites for substrates or inhibitors are not yet known.

Digital Object Identifier (DOI)

10.1186/1472-6807-11-27

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