Wordom: A User-Friendly Program for the Analysis of Molecular Structures, Trajectories, and Free Energy Surfaces
2011

Wordom: A User-Friendly Program for Molecular Analysis

publication Evidence: high

Author Information

Author(s): Michele Seeber, Angelo Felline, Francesco Raimondi, Stefanie Muff, Ran Friedman, Francesco Rao, Amedeo Caflisch, Francesca Fanelli

Primary Institution: University of Modena and Reggio Emilia

Conclusion

Wordom is a significantly improved program for analyzing molecular structures and dynamics, offering unique tools for free energy analysis and communication path identification.

Supporting Evidence

  • Wordom provides new analysis tools that are unique to the program.
  • The program allows for efficient structural analysis and free energy calculations.
  • Wordom has been enhanced for better user accessibility and performance.

Takeaway

Wordom is a computer program that helps scientists study molecules and how they behave. It makes it easier to see how molecules change and interact with each other.

Methodology

Wordom includes various modules for analyzing molecular structures, dynamics, and free energy surfaces, utilizing algorithms for secondary structure assignment, molecular surface calculations, and elastic network models.

Digital Object Identifier (DOI)

10.1002/jcc.21688

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