PneumoBrowse 2: an integrated visual platform for curated genome annotation and multiomics data analysis of Streptococcus pneumoniae
2025
PneumoBrowse 2: A New Platform for Studying Streptococcus pneumoniae Genomes
publication
Evidence: high
Author Information
Author(s): Janssen Axel B, Gibson Paddy S, Bravo Afonso M, de Bakker Vincent, Slager Jelle, Veening Jan-Willem
Primary Institution: University of Lausanne
Conclusion
PneumoBrowse 2 provides an updated and user-friendly platform for accessing detailed genome annotations and multiomics data of Streptococcus pneumoniae, enhancing research into its biology and treatment strategies.
Supporting Evidence
- PneumoBrowse 2 includes genome-wide data tracks for various studies on S. pneumoniae.
- The platform allows for easy access to diverse high-quality genome annotations.
- 18 phylogenetically diverse S. pneumoniae genomes have been added to the platform.
- Updated annotations reflect the latest insights into the genome of S. pneumoniae.
Takeaway
PneumoBrowse 2 is like a new, better library for scientists studying a germ called Streptococcus pneumoniae, helping them find important information about its genes and how it works.
Methodology
The platform was rebuilt using JBrowse 2 and includes updated genome annotations, high-resolution data tracks, and links to other databases.
Digital Object Identifier (DOI)
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