Effects of dependence in high-dimensional multiple testing problems
2008

Effects of Dependence in High-Dimensional Multiple Testing Problems

Sample size: 20 publication 10 minutes Evidence: moderate

Author Information

Author(s): Kim Kyung In, van de Wiel Mark A

Primary Institution: Eindhoven University of Technology

Hypothesis

How do dependence structures among variables affect the performance of False Discovery Rate (FDR) control procedures in high-dimensional data?

Conclusion

The adaptive Benjamini-Hochberg procedure is the most robust method for controlling the False Discovery Rate under dependence conditions.

Supporting Evidence

  • The study shows that methods like SAM and the q-value do not adequately control the FDR under dependence.
  • The adaptive Benjamini-Hochberg procedure is found to be the most robust method.
  • The simulation results indicate that the estimates of the number of true null hypotheses vary under different dependence conditions.

Takeaway

When scientists test many hypotheses at once, they can make mistakes. This study shows how to better control those mistakes when the tests are related to each other.

Methodology

The study used simulations to compare the performance of various FDR procedures under different dependence structures among variables.

Potential Biases

Potential biases may arise from the assumptions made about the distribution of p-values and the nature of dependencies.

Limitations

The study primarily focuses on specific correlation structures and may not generalize to all types of dependencies.

Statistical Information

P-Value

0.1

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1186/1471-2105-9-114

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