Comprehensive Phylogenetic Reconstruction of Amoebozoa Based on Concatenated Analyses of SSU-rDNA and Actin Genes
2011

Phylogenetic Reconstruction of Amoebozoa

Sample size: 139 publication Evidence: moderate

Author Information

Author(s): Lahr Daniel J. G., Grant Jessica, Nguyen Truc, Lin Jian Hua, Katz Laura A.

Primary Institution: University of Massachusetts, Amherst

Hypothesis

Can a comprehensive phylogenetic reconstruction of Amoebozoa be achieved using molecular data from SSU-rDNA and actin genes?

Conclusion

The study provides a comprehensive phylogenetic reconstruction of Amoebozoa, confirming several lower-level relationships while revealing that many higher-level relationships remain unresolved.

Supporting Evidence

  • The study analyzed 139 taxa using molecular data from SSU-rDNA and actin genes.
  • 18 alternative reconstructions were generated to assess the effects of various factors on phylogenetic relationships.
  • Many lower-level relationships were confirmed, but higher-level relationships remain largely unresolved.

Takeaway

Scientists studied tiny organisms called amoebas to understand how they are related to each other, and found that some relationships are clear, but many are still a mystery.

Methodology

The study used molecular data from SSU-rDNA and actin genes to analyze 139 taxa and performed 18 different phylogenetic reconstructions.

Limitations

The data are insufficient to corroborate or reject the majority of proposed higher-level relationships.

Digital Object Identifier (DOI)

10.1371/journal.pone.0022780

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