Differences in the Number of Intrinsically Disordered Regions between Yeast Duplicated Proteins, and Their Relationship with Functional Divergence
2011

Differences in Intrinsically Disordered Regions between Yeast Duplicated Proteins

Sample size: 793 publication Evidence: high

Author Information

Author(s): Montanari Floriane, Shields Denis C., Khaldi Nora, Lustig Arthur J.

Primary Institution: UCD Conway Institute of Biomolecular and Biomedical Research, University College Dublin

Hypothesis

Can changes in intrinsically disordered regions after genome duplication create functional divergence in proteins?

Conclusion

The study shows that intrinsic disorder gain and loss in proteins is a mechanism for functional divergence following genome duplication.

Supporting Evidence

  • Duplicated genes are significantly more intrinsically disordered than singletons.
  • 29% of duplicated genes have more intrinsic disorder than their orthologs.
  • 37% of duplicated genes have less intrinsic disorder than their orthologs.

Takeaway

When yeast genes duplicate, they often gain or lose parts that are flexible and can change how they interact with other proteins, which helps them do new things.

Methodology

The study analyzed the gain and loss of intrinsically disordered regions in duplicated proteins using Saccharomyces cerevisiae and Lachancea kluyveri.

Potential Biases

Potential bias in the retention of intrinsically disordered proteins after duplication.

Limitations

The study may overestimate or underestimate the number of intrinsically disordered regions due to the limitations of the prediction tools used.

Participant Demographics

The study focused on yeast species, specifically Saccharomyces cerevisiae and Lachancea kluyveri.

Statistical Information

P-Value

p<2.2e-16

Statistical Significance

p<2.2e-16

Digital Object Identifier (DOI)

10.1371/journal.pone.0024989

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