Cell-specific occupancy of an extended repertoire of CREM and CREB binding loci in male germ cells
2010

Mapping CREM and CREB Binding Sites in Male Germ Cells

Sample size: 12 publication 10 minutes Evidence: high

Author Information

Author(s): Martianov Igor, Choukrallah Mohamed-Amin, Krebs Arnaud, Ye Tao, Legras Stephanie, Rijkers Erikjan, Van Ijcken Wilfred, Jost Bernard, Sassone-Corsi Paolo, Davidson Irwin

Primary Institution: Institut de Génétique et de Biologie Moléculaire et Cellulaire

Hypothesis

How do CREM and CREB binding sites differ in male germ cells?

Conclusion

CREM and CREB occupy a large number of promoters in a highly cell-specific manner.

Supporting Evidence

  • More than 9000 genomic loci were identified as being occupied by CREM and CREB.
  • CREM occupied over 6700 target loci in round spermatids.
  • The study provides the first comprehensive analysis of CREB/CREM regulatory potential in vivo.

Takeaway

This study looked at how two proteins, CREM and CREB, attach to DNA in male germ cells to help control gene activity.

Methodology

Chromatin immunoprecipitation coupled to sequencing (ChIP-seq) was used to map binding sites.

Limitations

The study may not account for all potential binding sites or regulatory mechanisms.

Participant Demographics

Adult male mice were used for the study.

Digital Object Identifier (DOI)

10.1186/1471-2164-11-530

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