Identification of Novel Single Nucleotide Polymorphisms in Inflammatory Genes as Risk Factors Associated with Trachomatous Trichiasis
2008

Genetic Factors in Trachomatous Trichiasis

Sample size: 538 publication 10 minutes Evidence: high

Author Information

Author(s): Atik Berna, Skwor Troy A., Kandel Ram Prasad, Sharma Bassant, Adhikari Him Kant, Steiner Lori, Erlich Henry, Dean Deborah

Primary Institution: Children's Hospital Oakland Research Institute

Hypothesis

Are specific single nucleotide polymorphisms (SNPs) in inflammatory genes associated with the risk of developing trachomatous trichiasis (TT)?

Conclusion

The study found significant associations between certain genetic polymorphisms and the risk of developing trachomatous trichiasis, suggesting that genetic factors play a role in disease susceptibility.

Supporting Evidence

  • The study identified significant associations between TNFA (-308GA), LTA (252A), VCAM1 (-1594TC), and IL9 (T113M) polymorphisms and the risk of TT.
  • TT risk decreased 5 times with specific combinations of SNPs.
  • TT risk increased 13.5 times with other combinations of SNPs.
  • The study highlights the importance of genetic factors in understanding trachoma pathogenesis.

Takeaway

Some people are more likely to get a serious eye problem called trachomatous trichiasis because of their genes. This study looked at how certain gene changes can affect this risk.

Methodology

A case-control study was conducted to identify SNPs in 36 inflammatory genes among 538 individuals of Tharu ethnicity in Nepal, using logic regression modeling for analysis.

Potential Biases

Potential biases may arise from the case-control design and the specific population studied.

Limitations

The study was limited to a specific ethnic group and geographic region, which may affect the generalizability of the findings.

Participant Demographics

Participants were of Tharu ethnicity residing in a trachoma endemic region of Nepal.

Statistical Information

P-Value

0.001

Confidence Interval

0.11–0.33

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1371/journal.pone.0003600

Want to read the original?

Access the complete publication on the publisher's website

View Original Publication