Complexity, connectivity, and duplicability as barriers to lateral gene transfer
2007

Barriers to Gene Transfer in Bacteria

Sample size: 4302 publication Evidence: moderate

Author Information

Author(s): Wellner Alon, Lurie Mor N, Gophna Uri

Primary Institution: Tel Aviv University

Hypothesis

Does protein complexity and connectivity affect lateral gene transfer in prokaryotes?

Conclusion

High complexity and connectivity generally do not impede gene transfer, but essential genes with low duplicability and high connectivity tend to be transferred vertically.

Supporting Evidence

  • Essential genes in E. coli are often singletons and show high vertical descent.
  • Transferred genes are less involved in protein-protein interactions.
  • Low duplicability is linked to a lower chance of horizontal gene transfer.

Takeaway

This study looks at how genes move between bacteria and finds that complicated genes usually stay put, while simpler ones can move around more easily.

Methodology

The study analyzed protein interaction data from Escherichia coli to test the complexity and balance hypotheses regarding gene transfer.

Limitations

The findings may not apply universally across all prokaryotic species due to differences in gene transfer mechanisms.

Statistical Information

P-Value

p<0.00001

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1186/gb-2007-8-8-r156

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