Analysis of alcohol dependence phenotype in the COGA families using covariates to detect linkage
2005

Analysis of Alcohol Dependence in Families

Sample size: 143 publication Evidence: moderate

Author Information

Author(s): Brian H Reck, Nandita Mukhopadhyay, Hui-Ju Tsai, Daniel E Weeks

Primary Institution: University of Pittsburgh

Hypothesis

Can covariate-based methods improve the detection of linkage for alcohol dependence in family studies?

Conclusion

The study found that covariate-based methods detected linkage signals for alcohol dependence, but there was little agreement among the various methods used.

Supporting Evidence

  • Linkage signals were detected on chromosomes 3, 4, 7, 10, and 12.
  • The highest peak occurred at the GABRB1 gene.
  • Empirical p-values less than 0.001 were found for significant linkage.
  • The study compared results from covariate-based methods to traditional linkage analysis.

Takeaway

Researchers looked at families to find genes related to alcohol dependence and used new methods to see if they could find more links than before.

Methodology

The study applied four covariate-based methods to analyze genome scan data on alcohol dependence in families.

Potential Biases

The choice of covariates could introduce confounding effects, potentially reducing the power of the analysis.

Limitations

The covariate selection was heuristic and may not have been optimal for identifying true risk factors.

Participant Demographics

Participants were from the Collaborative Studies on Genetics of Alcoholism families.

Statistical Information

P-Value

<0.001

Statistical Significance

p<0.001

Digital Object Identifier (DOI)

10.1186/1471-2156-6-S1-S143

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