MLPAinter for MLPA interpretation: an integrated approach for the analysis, visualisation and data management of Multiplex Ligation-dependent Probe Amplification
2010

MLPAinter: A Tool for Analyzing MLPA Data

Sample size: 3000 publication Evidence: high

Author Information

Author(s): Ronald van Eijk, Paul HC Eilers, Remco Natté, Anne-Marie Cleton-Jansen, Hans Morreau, Tom van Wezel, Jan Oosting

Primary Institution: Leiden University Medical Center

Hypothesis

Can we develop a software tool to improve the analysis and management of MLPA data?

Conclusion

MLPAinter streamlines the handling of MLPA data, ensuring efficient data flow from experiment initiation to report generation.

Supporting Evidence

  • MLPA allows for the analysis of up to 50 genomic sequences in one experiment.
  • The software integrates data management, normalization, and visualization.
  • MLPAinter has been used successfully for over two years in managing over 3000 samples.

Takeaway

MLPAinter is a computer program that helps scientists analyze DNA data quickly and easily, making it simpler to find genetic changes.

Methodology

Developed a relational database and a Delphi front-end for managing MLPA data, including normalization and visualization.

Limitations

The system currently does not fully integrate all information generated during an experiment.

Digital Object Identifier (DOI)

10.1186/1471-2105-11-67

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