SNiPlay: A Tool for SNP Detection and Analysis in Grapevine
Author Information
Author(s): Dereeper Alexis, Nicolas Stéphane, Le Cunff Loïc, Bacilieri Roberto, Doligez Agnès, Peros Jean-Pierre, Ruiz Manuel, This Patrice
Primary Institution: Diversity, Genetics and Genomics of grapevine, UMR DIAPC 1097, INRA, Montpellier, France
Hypothesis
Can a web-based tool effectively manage and analyze SNP data for grapevine genetic diversity projects?
Conclusion
SNiPlay simplifies the management and analysis of large SNP datasets, enabling geneticists to obtain advanced results more efficiently.
Supporting Evidence
- SNiPlay allows for the integration of SNP data with external information like phenotype and geographic origin.
- The tool automates SNP detection and provides various statistical analyses.
- SNiPlay is designed to be user-friendly and accessible via the internet.
Takeaway
SNiPlay is a website that helps scientists find and study tiny changes in plant DNA called SNPs, making their work easier and faster.
Methodology
SNiPlay integrates various software tools to detect SNPs and analyze genetic data through a user-friendly web interface.
Limitations
The server has input limitations based on the type of data and the number of files that can be processed at once.
Digital Object Identifier (DOI)
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