MeMo: a hybrid SQL/XML approach to metabolomic data management for functional genomics
2006

MeMo: A Model for Metabolomic Data Management

publication Evidence: moderate

Author Information

Author(s): Spasić Irena, Dunn Warwick B, Velarde Giles, Tseng Andy, Jenkins Helen, Hardy Nigel, Oliver Stephen G, Kell Douglas B

Primary Institution: The University of Manchester

Hypothesis

MeMo aims to provide a structured and efficient way to manage large-scale metabolomic data for functional genomics.

Conclusion

MeMo effectively integrates relational database technology with XML to manage complex metabolomic data.

Supporting Evidence

  • MeMo has been implemented as a relational database to handle metabolomic data efficiently.
  • The model supports integration with other databases through ontological annotation.
  • MeMo is designed to be extensible to accommodate new experimental techniques.

Takeaway

MeMo is like a smart filing system for scientists that helps them organize and understand a lot of data about tiny molecules in living things.

Methodology

MeMo combines SQL and XML technologies to create a relational database for metabolomic data management.

Limitations

The model may not cover all aspects of metabolomics and relies on existing standards that are still evolving.

Digital Object Identifier (DOI)

10.1186/1471-2105-7-281

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