Optimization of Protoplast Preparation Conditions in Lyophyllum decastes and Transcriptomic Analysis Throughout the Process
2024

Optimizing Protoplast Preparation in Lyophyllum decastes

Sample size: 9 publication 10 minutes Evidence: high

Author Information

Author(s): Li Xiaobin, Qin Ying, Kong Yufei, Karunarathna Samantha Chandranath, Liang Yunjiang, Xu Jize, Yin Yanbin

Primary Institution: College of Agriculture, Yanbian University, Yanji, China

Hypothesis

This study aims to optimize protoplast preparation conditions and analyze transcriptional changes during the process in Lyophyllum decastes.

Conclusion

The study identified optimal conditions for protoplast preparation and regeneration, yielding significant insights into the molecular mechanisms involved.

Supporting Evidence

  • The optimal protoplast yield was found to be 5.475 × 10^6 cells/mL under specific conditions.
  • RNA-seq analysis revealed 2432 differentially expressed genes during protoplast formation.
  • Regeneration medium Z5, containing L. decastes mycelial extract, achieved a regeneration rate of 2.86%.
  • Key genes involved in cell wall synthesis were significantly upregulated during regeneration.
  • Protoplasts showed enhanced antioxidant responses during the preparation and regeneration phases.

Takeaway

Researchers figured out the best way to prepare special mushroom cells called protoplasts, which can help scientists study how mushrooms grow and heal.

Methodology

The study involved optimizing protoplast preparation through single-factor and orthogonal experiments, followed by transcriptomic analysis using RNA-seq.

Statistical Information

P-Value

p<0.05

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.3390/jof10120886

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