The LPS-Induced Transcriptional Upregulation of the Chicken Lysozyme Locus Involves CTCF Eviction and Noncoding RNA Transcription
2008

How LPS Stimulates Chicken Lysozyme Gene Activation

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Author Information

Author(s): Lefevre Pascal, Witham James, Lacroix Claire E., Cockerill Peter N., Bonifer Constanze

Primary Institution: University of Leeds

Hypothesis

The study investigates the mechanism by which LPS induces transcriptional activation of the chicken lysozyme gene.

Conclusion

LPS stimulation leads to the eviction of the CTCF protein from the lysozyme gene locus, allowing for gene activation through chromatin remodeling.

Supporting Evidence

  • LPS treatment causes extensive chromatin modifications within the lysozyme locus.
  • CTCF eviction is specific to the lysozyme gene and does not occur at other CTCF target sites.
  • LINoCR, a noncoding RNA, is transcribed during LPS stimulation and correlates with lysozyme gene activation.

Takeaway

When bacteria trigger inflammation, a special protein called CTCF gets pushed away from a gene, helping that gene to turn on and make more of a protein called lysozyme.

Methodology

The study used chromatin immunoprecipitation (ChIP) assays, RNA analysis, and nucleosome mapping to investigate the effects of LPS on the chicken lysozyme gene.

Digital Object Identifier (DOI)

10.1016/j.molcel.2008.07.023

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