Stat3 and c-Myc Genome-Wide Promoter Occupancy in Embryonic Stem Cells
2008

Stat3 and c-Myc Binding in Embryonic Stem Cells

publication Evidence: high

Author Information

Author(s): Benjamin L. Kidder, Jim Yang, Stephen Palmer

Primary Institution: EMD Serono Research Institute, Inc.

Hypothesis

To further understand ES cell transcriptional networks, we used genome-wide chromatin immunoprecipitation and microarray analysis (ChIP-chip) to map Stat3 and c-Myc binding targets in ES cells.

Conclusion

Stat3 and c-Myc occupy a significant number of genes whose expression is highly enriched in embryonic stem cells.

Supporting Evidence

  • Stat3 and c-Myc bind many ES cell enriched genes.
  • Stat3 binds both active and inactive genes in ES cells.
  • c-Myc binds predominantly active genes in ES cells.
  • Stat3 targets are differentially expressed in ES cells following removal of LIF.

Takeaway

This study shows that two important proteins, Stat3 and c-Myc, help keep stem cells in a state where they can become any type of cell.

Methodology

Genome-wide chromatin immunoprecipitation and microarray analysis (ChIP-chip) were used to map Stat3 and c-Myc binding targets in embryonic stem cells.

Statistical Information

P-Value

p<0.05

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1371/journal.pone.0003932

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