Investigation of SNPs in the porcine desmoglein 1 gene
2007

Study of Genetic Variations in Pigs Related to Skin Disease

Sample size: 64 publication Evidence: moderate

Author Information

Author(s): Daugaard Lise, Andresen Lars Ole, Fredholm Merete

Primary Institution: The National Veterinary Institute, Technical University of Denmark

Hypothesis

Are single nucleotide polymorphisms (SNPs) in the porcine desmoglein 1 gene correlated to susceptibility or resistance to exudative epidermitis in pigs?

Conclusion

The study indicated a possible correlation between the genotypes of two out of seven SNPs found in the porcine desmoglein 1 gene and the susceptibility to exudative epidermitis.

Supporting Evidence

  • Seven SNPs were identified in the porcine desmoglein 1 gene.
  • Four of the SNPs were located in a region important for toxin cleavage.
  • Statistical analysis showed significant differences in genotype distribution between affected and unaffected piglets for SNPs 6 and 7.

Takeaway

Scientists looked at the genes of piglets to see if certain changes in their DNA made them more likely to get a skin disease. They found some clues that suggest this might be true.

Methodology

Blood samples from 32 affected and 32 unaffected piglets were collected, and the desmoglein 1 gene was sequenced to identify SNPs.

Potential Biases

The study may not account for all factors influencing susceptibility to the disease, such as environmental conditions.

Limitations

The study's findings may not reflect the true allele frequencies in the population due to relatedness among some animals.

Participant Demographics

The study involved 64 piglets from two Danish herds, with 32 affected and 32 unaffected.

Statistical Information

P-Value

p ≤ 0.05

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1186/1746-6148-3-4

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