Molecular Detection of Vertebrates in Stream Water: A Demonstration Using Rocky Mountain Tailed Frogs and Idaho Giant Salamanders
2011

Detecting Stream Amphibians Using Environmental DNA

Sample size: 5 publication Evidence: moderate

Author Information

Author(s): Caren S. Goldberg, David S. Pilliod, Robert S. Arkle, Lisette P. Waits

Primary Institution: University of Idaho

Hypothesis

Can environmental DNA (eDNA) techniques effectively detect low-density vertebrates in fast-moving streams?

Conclusion

The study successfully demonstrated that eDNA techniques can detect Idaho giant salamanders and Rocky Mountain tailed frogs in stream water, although detection rates varied by season.

Supporting Evidence

  • eDNA techniques were confirmed as sensitive and efficient for documenting aquatic vertebrates.
  • Idaho giant salamanders were detected in all samples, while Rocky Mountain tailed frogs were detected in four out of five streams.
  • Detection rates varied by season, with lower detection of Rocky Mountain tailed frogs in early spring.

Takeaway

Scientists found a way to use tiny bits of DNA in water to find frogs and salamanders in streams, even when there aren't many around.

Methodology

Water samples were collected from five streams and tested for DNA of two amphibian species using specific primers and various PCR protocols.

Limitations

The study only sampled one stream in the first phase and detection of Rocky Mountain tailed frogs was lower in early spring compared to early fall.

Statistical Information

P-Value

0.86

Confidence Interval

95% C.I. 25 – 382 fluorescent units

Digital Object Identifier (DOI)

10.1371/journal.pone.0022746

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