Robustness of genome-wide scanning using archived dried blood spot samples as a DNA source
2011

Using Dried Blood Spot Samples for Genetic Studies

Sample size: 4641 publication 10 minutes Evidence: high

Author Information

Author(s): Hollegaard Mads V, Grove Jakob, Grauholm Jonas, Kreiner-Møller Eskil, Bønnelykke Klaus, Nørgaard Mette, Benfield Thomas L, Nørgaard-Pedersen Bent, Mortensen Preben B, Mors Ole, Sørensen Henrik T, Harboe Zitta B, Børglum Anders D, Demontis Ditte, Ørntoft Torben F, Bisgaard Hans, Hougaard David M

Primary Institution: Statens Serum Institut

Hypothesis

Can archived dried blood spot samples provide a reliable DNA source for genome-wide association studies?

Conclusion

Archived DBS samples from the Danish Newborn Screening Biobank are a reliable resource for DNA and can be used for genome-wide association studies.

Supporting Evidence

  • 4,586 samples met the success criterion of a genetic call-rate above 97%.
  • Concordance rates were 99.997% in methodological replications and 99.999% in technical replications.
  • Storage conditions significantly affected the genotype call rates.

Takeaway

Scientists can use tiny blood samples from newborns to study genes that might cause diseases, and these samples work really well for testing.

Methodology

The study involved extracting DNA from 4,641 dried blood spot samples and performing whole-genome amplification followed by genome-wide association studies using different genotyping arrays.

Potential Biases

Potential biases may arise from the selection of samples and the storage conditions affecting DNA quality.

Limitations

The study's findings may not be generalizable beyond the specific conditions and samples used, and the effects of storage conditions and filter paper types were not fully explored.

Participant Demographics

The samples were from Danish newborns, with a mix of male and female subjects across three studies.

Statistical Information

P-Value

0.000

Confidence Interval

(9.39; 11.5)

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1186/1471-2156-12-58

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