TIMP-1 enhancer sequence – real or bacterial?
2003

Concerns About TIMP-1 Enhancer Sequence

Commentary

Author Information

Author(s): I M Clark, D A Young, D R Edwards

Primary Institution: School of Biological Sciences, University of East Anglia

Conclusion

The authors question the validity of the HTE-1 enhancer sequence's location within the TIMP-1 gene based on genomic analysis.

Supporting Evidence

  • The HTE-1 enhancer element is claimed to be in the TIMP-1 gene but does not match genomic sequences.
  • The best match for HTE-1 is found outside of the TIMP-2 gene on chromosome 17.
  • The HTE-1 sequence is fully matched in the E. coli genome.

Takeaway

The researchers are unsure if a specific DNA sequence is really part of a gene because it matches a sequence found in bacteria instead.

Digital Object Identifier (DOI)

10.1038/sj.bjc.6601353

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