Open and closed structures of L-arginine oxidase by cryo-electron microscopy and X-ray crystallography
2024

Structure of L-arginine oxidase from Pseudomonas sp. TPU 7192

publication Evidence: high

Author Information

Author(s): Yamaguchi Hiroki, Takahashi Kazutoshi, Numoto Nobutaka, Suzuki Hiroshi, Tatsumi Moemi, Kamegawa Akiko, Nishikawa Kouki, Asano Yasuhisa, Mizukoshi Toshimi, Miyano Hiroshi, Fujiyoshi Yoshinori, Sugiki Masayuki

Primary Institution: Ajinomoto Co. Inc.

Hypothesis

The study aims to elucidate the structure and substrate specificity of L-arginine oxidase (AROD) derived from Pseudomonas sp. TPU 7192.

Conclusion

The study reveals that PT-AROD has an octameric structure and high substrate specificity for L-arginine, with key residues influencing its selectivity.

Supporting Evidence

  • PT-AROD was characterized using cryo-electron microscopy at a resolution of 2.3 Å.
  • PT-AROD exhibits high substrate specificity, with 100% activity towards L-arginine.
  • Mutations in specific residues significantly affect the substrate selectivity of PT-AROD.

Takeaway

Scientists studied an enzyme that helps measure a substance called L-arginine in the body, and they found out how its shape helps it work really well with L-arginine.

Methodology

The structure of PT-AROD was determined using cryo-electron microscopy and X-ray crystallography.

Digital Object Identifier (DOI)

10.1093/jb/mvae070

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