Deep Sequencing Reveals Direct Targets of Gammaherpesvirus-Induced mRNA Decay and Suggests That Multiple Mechanisms Govern Cellular Transcript Escape
2011

How Gammaherpesvirus Affects Cellular mRNA Stability

publication 10 minutes Evidence: high

Author Information

Author(s): Clyde Karen Glaunsinger, Britt A. Means

Primary Institution: Department of Plant and Microbial Biology, University of California, Berkeley, California, United States of America

Hypothesis

What mechanisms allow certain cellular mRNAs to escape degradation during gammaherpesvirus infection?

Conclusion

The study found that while most cellular mRNAs are downregulated during gammaherpesvirus infection, some mRNAs can escape degradation through various mechanisms.

Supporting Evidence

  • Most cellular mRNAs are downregulated during gammaherpesvirus infection.
  • Some mRNAs can escape degradation through intrinsic resistance or other mechanisms.
  • muSOX is a more potent shutoff factor than SOX in 293T cells.

Takeaway

When a virus infects cells, it usually makes the cells stop making their own proteins. But some proteins can still be made even when the virus is around, and this study looks at how that happens.

Methodology

The researchers used deep sequencing technology to analyze cellular mRNA levels in the presence and absence of viral proteins SOX and muSOX.

Potential Biases

Potential bias in the selection of mRNAs analyzed and the specific cell line used for experiments.

Limitations

The study primarily focused on specific cell lines and may not fully represent all cellular responses to gammaherpesvirus infection.

Participant Demographics

HEK-293T cells were used for the experiments.

Statistical Information

P-Value

p<0.0001

Statistical Significance

p<0.0001

Digital Object Identifier (DOI)

10.1371/journal.pone.0019655

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