BioVenn – a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams
2008

BioVenn: A Web App for Venn Diagrams

publication Evidence: moderate

Author Information

Author(s): Tim Hulsen, Jacob de Vlieg, Wynand Alkema

Primary Institution: Radboud University Nijmegen Medical Centre

Hypothesis

BioVenn aims to provide a web application that generates area-proportional Venn diagrams for biological data sets.

Conclusion

BioVenn is an easy-to-use web application that generates area-proportional Venn diagrams from biological identifier lists.

Supporting Evidence

  • BioVenn allows users to input lists of biological identifiers and generates Venn diagrams.
  • The application supports a wide range of biological databases.
  • Users can adjust parameters like colors and text size easily.

Takeaway

BioVenn helps scientists see how different lists of genes or proteins overlap by creating colorful diagrams on the web.

Methodology

The application uses a PHP script to calculate the proportions of the Venn diagram based on user-inputted biological identifiers.

Limitations

The application may not always accurately represent the three-circle overlap due to mathematical constraints.

Digital Object Identifier (DOI)

10.1186/1471-2164-9-488

Want to read the original?

Access the complete publication on the publisher's website

View Original Publication