EST mining identifies proteins putatively secreted by the anthracnose pathogen Colletotrichum truncatum
2011

Identifying Secreted Proteins from the Anthracnose Pathogen Colletotrichum truncatum

Sample size: 5000 publication 10 minutes Evidence: moderate

Author Information

Author(s): Bhadauria Vijai, Banniza Sabine, Vandenberg Albert, Selvaraj Gopalan, Wei Yangdou

Primary Institution: University of Saskatchewan

Hypothesis

The study aims to identify proteins that are secreted during the biotrophy-necrotrophy switch of Colletotrichum truncatum.

Conclusion

The study catalogs proteins that may play a role in establishing a compatible interaction with the host plant during the infection process.

Supporting Evidence

  • Nearly 39% of the ESTs were predicted to encode proteins of fungal origin.
  • 162 ESTs were predicted to contain N-terminal signal peptides.
  • Eleven candidate effector genes were identified based on features common to characterized fungal effectors.

Takeaway

Scientists looked at proteins made by a fungus that causes disease in plants to understand how it infects them.

Methodology

A directional cDNA library was constructed from mRNA isolated from infected lentil tissues, generating 5000 expressed sequence tags (ESTs) for analysis.

Participant Demographics

Infected lentil cultivar 'Eston' was used for the study.

Digital Object Identifier (DOI)

10.1186/1471-2164-12-327

Want to read the original?

Access the complete publication on the publisher's website

View Original Publication