The Autoimmune Disease Database: a dynamically compiled literature-derived database
2006

The Autoimmune Disease Database: a literature-derived database

publication Evidence: moderate

Author Information

Author(s): Karopka Thomas, Fluck Juliane, Mevissen Heinz-Theodor, Glass Änne

Primary Institution: Institute for Medical Informatics and Biometry, University of Rostock

Conclusion

The Autoimmune Disease Database provides a tool for researchers to explore potential gene-disease relationships in autoimmune diseases.

Supporting Evidence

  • The database covers 103 autoimmune disease concepts.
  • It includes over 1,200 disease names and links to 541,690 abstracts.
  • Named entity recognition techniques achieved a precision of 80-95%.

Takeaway

This database helps scientists find connections between genes and autoimmune diseases by searching through a lot of medical literature.

Methodology

The database was compiled using named entity recognition techniques to identify genes and diseases from Medline abstracts.

Limitations

The database does not distinguish between positive and negative associations between genes and diseases.

Digital Object Identifier (DOI)

10.1186/1471-2105-7-325

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