Recipes and mechanisms of cellular reprogramming: a case study on budding yeast Saccharomyces cerevisiae
2011

Cellular Reprogramming in Yeast

Sample size: 10000 publication 10 minutes Evidence: high

Author Information

Author(s): Ding Shengchao, Wang Wei

Primary Institution: University of California, San Diego

Hypothesis

Can a systems biology approach identify effective recipes for cellular reprogramming in yeast?

Conclusion

Cellular reprogramming can be achieved through various perturbations, and the success of reprogramming depends on the original cell's heterogeneity.

Supporting Evidence

  • The study found that the heterogeneity of natural cells affects the success of reprogramming.
  • Different perturbations can lead to various reprogramming outcomes.
  • The model accurately predicted sporulation efficiencies correlating with experimental data.

Takeaway

Scientists can change yeast cells from one type to another by tweaking certain genes, and how well this works depends on how different the original cells are.

Methodology

A systems biology approach was used to model a genetic network and predict phenotypic outcomes based on perturbations.

Potential Biases

Potential biases in the model due to missing regulatory interactions.

Limitations

The model may not capture all regulatory interactions and relies on a simplified Boolean network.

Participant Demographics

Budding yeast (Saccharomyces cerevisiae) was used as the model organism.

Statistical Information

P-Value

8.69 × 10-11

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1186/1752-0509-5-50

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