Comparison of public peak detection algorithms for MALDI mass spectrometry data analysis
2009

Comparison of Peak Detection Algorithms for Mass Spectrometry Data

publication Evidence: high

Author Information

Author(s): Yang Chao, He Zengyou, Yu Weichuan

Primary Institution: The Hong Kong University of Science and Technology

Hypothesis

What is the performance of different peak detection algorithms in mass spectrometry data analysis?

Conclusion

The continuous wavelet-based algorithm provides the best average performance among the compared peak detection methods.

Supporting Evidence

  • The study provides a comprehensive survey of existing peak detection methods.
  • Five typical peak detection algorithms were selected for performance comparison.
  • The results show that the continuous wavelet-based algorithm outperforms others.

Takeaway

This study looks at different ways to find peaks in mass spectrometry data and finds that one method works better than the others.

Methodology

The study categorizes existing peak detection algorithms and compares their performance using both simulation data and real MALDI mass spectrometry data.

Limitations

The algorithms mainly focus on identifying peak positions and do not address how to compute peak abundance.

Digital Object Identifier (DOI)

10.1186/1471-2105-10-4

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