Application of family-based association testing to assess the genotype-phenotype association involved in complex traits using single-nucleotide polymorphisms
2005

Family-Based Association Testing for Kofendred Personality Disorder

Sample size: 100 publication Evidence: moderate

Author Information

Author(s): Wang Ming-Hsi, Guo Mitchell, Shugart Yin Y

Primary Institution: Johns Hopkins University

Hypothesis

Can family-based association tests (FBAT) detect associations between SNP markers and the latent trait of Kofendred Personality Disorder?

Conclusion

FBAT was able to detect significant associations for certain SNPs related to Kofendred Personality Disorder with a reasonable power.

Supporting Evidence

  • FBAT detected significant associations for SNPs B03T3056, B03T3057, and B03T3058.
  • The power to detect significant associations was 98%, 87%, and 71% for the respective SNPs.
  • The overall false-positive rate was calculated to be 0.06.

Takeaway

The study used a special test to find links between genes and a personality disorder in families, and it found some strong connections.

Methodology

FBAT was used to test for genetic association in 100 simulated replicates of the Aipotu population.

Potential Biases

Potential biases due to population admixture and the treatment of different nuclear families as independent.

Limitations

The study did not use the '-e' option for multivariate analysis, which could have affected the results.

Participant Demographics

100 nuclear families with an average of 4.8 siblings per family.

Statistical Information

P-Value

0.0002, 0.00072, 0.0038

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1186/1471-2156-6-S1-S68

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