Sci-ModoM: A Database for RNA Modification Data
Author Information
Author(s): Boileau Etienne, Wilhelmi Harald, Busch Anne, Cappannini Andrea, Hildebrand Andreas, Bujnicki Janusz M, Dieterich Christoph
Primary Institution: Klaus Tschira Institute for Integrative Computational Cardiology
Conclusion
Sci-ModoM provides a comprehensive and user-friendly database for accessing and comparing RNA modification data across multiple datasets.
Supporting Evidence
- Sci-ModoM offers a holistic view of the epitranscriptomic landscape.
- It provides quantitative measurements per site and dataset.
- Users can compare modifications site-wise across datasets.
- The database is open source and freely accessible.
Takeaway
Sci-ModoM is like a big library where scientists can find and compare information about tiny changes in RNA that help control how genes work.
Methodology
The database integrates high-throughput RNA modification data from various studies, providing quantitative measurements and metadata for over six million modification sites.
Potential Biases
Results may be influenced by dataset-specific biases due to the reliance on published data.
Limitations
The database currently focuses on human and mouse RNA modifications and may not cover all species or RNA types.
Participant Demographics
Data primarily includes human and mouse RNA modifications.
Digital Object Identifier (DOI)
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