Complete Genome Viral Phylogenies Suggests the Concerted Evolution of Regulatory Cores and Accessory Satellites Evolution of Viral Cores
2008

Evolution of Viral Cores and Satellites

Sample size: 99 publication 10 minutes Evidence: high

Author Information

Author(s): Zanotto Paolo Marinho de Andrade, Krakauer David C.

Primary Institution: Instituto de Ciências Biomédicas - ICB II, University of São Paulo, São Paulo, Brazil

Hypothesis

The study investigates the concerted evolution of viral genomes in four families of DNA viruses.

Conclusion

The history of the polymerase gene is highly predictive of the history of the genome as a whole, indicating a mutualistic relationship between core and satellite genes.

Supporting Evidence

  • The study found that the rate of gene gain in baculovirus and poxviruses is significantly higher than the rate of gene loss.
  • Phylogenetic trees showed strong congruence between core and satellite genomes.
  • Codivergence events were observed, indicating shared evolutionary history among viral families.

Takeaway

This study shows that viruses evolve by sharing genes with their hosts, and that their genomes are like a team where some genes are essential and others help them adapt.

Methodology

The study constructed DNA-dependent DNA polymerase-based phylogenies and whole genome sequences to compare genomic evolution across four distinct viral families.

Limitations

The study primarily focuses on DNA viruses and may not generalize to RNA viruses.

Statistical Information

P-Value

<0.0012

Statistical Significance

p<0.0012

Digital Object Identifier (DOI)

10.1371/journal.pone.0003500

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