Faunus: An object oriented framework for molecular simulation
2008

Faunus: A Framework for Molecular Simulation

publication Evidence: moderate

Author Information

Author(s): Lund Mikael, Trulsson Martin, Persson Björn

Primary Institution: Institute of Organic Chemistry and Biochemistry, The Academy of Sciences of the Czech Republic

Conclusion

C++ and the Standard Template Library (STL) provide a high-performance platform for generic molecular modeling.

Supporting Evidence

  • The library allows for easy implementation of additional features by multiple developers.
  • Performance issues related to high-level coding abstraction are discussed.
  • Automatic generation of code documentation from inline comments is a key feature.

Takeaway

This study introduces a software library called Faunus that helps scientists simulate molecules easily using C++ programming. It makes it simple to model how proteins behave in different environments.

Methodology

The study presents a C++ class library designed for Monte Carlo simulations of molecular systems, focusing on modular design and performance optimization.

Limitations

The library is still under development and may not cover all molecular simulation needs.

Digital Object Identifier (DOI)

10.1186/1751-0473-3-1

Want to read the original?

Access the complete publication on the publisher's website

View Original Publication