Isolation, identification and complete genome sequence analysis of a strain of foot-and-mouth disease virus serotype Asia1 from pigs in southwest of China
2011

Isolation and Genome Analysis of Foot-and-Mouth Disease Virus from Pigs

Sample size: 3 publication Evidence: moderate

Author Information

Author(s): Yang Xin, Zhou Ying-shun, Wang Hong-ning, Zhang Yi, Wei Kun, Wang Ting

Primary Institution: School of Life Science, Sichuan University

Hypothesis

Can a strain of foot-and-mouth disease virus serotype Asia1 be isolated from pigs in China?

Conclusion

This study reports the first isolation and identification of a strain of FMDV type Asia1 from naturally infected pigs.

Supporting Evidence

  • The complete genome of the isolated strain was 8161 nucleotides long.
  • The strain was designated as Asia1/WHN/CHA/06.
  • Phylogenetic analysis showed that the strain is closely related to JS/CHA/05.

Takeaway

Researchers found a virus that usually affects cows and sheep in pigs for the first time, and they studied its genetic makeup.

Methodology

The study involved collecting samples from pigs, isolating the virus in cell cultures, and sequencing its complete genome.

Limitations

The study did not manage to sequence the poly(C) tract of the virus, which is often difficult to amplify.

Participant Demographics

Samples were collected from pigs in a farm in southwest China.

Digital Object Identifier (DOI)

10.1186/1743-422X-8-175

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