Analysis of the genetic variation in Mycobacterium tuberculosis strains by multiple genome alignments
2008

Genetic Variation in Mycobacterium tuberculosis Strains

Sample size: 6 publication Evidence: moderate

Author Information

Author(s): Andrés Cubillos-Ruiz, Juan Morales, María Mercedes Zambrano

Primary Institution: Corporación Corpogen

Hypothesis

How does genetic variation occur in Mycobacterium tuberculosis strains?

Conclusion

The study shows that Mycobacterium tuberculosis is undergoing an active process of gene decay, which may affect its adaptation and virulence.

Supporting Evidence

  • The genetic variation found in six M. tuberculosis strains does not involve significant genomic rearrangements.
  • Most of the variation results from deletion and transposition events associated with insertion sequences.
  • The study identified strain-specific polymorphisms that may help explain differences in virulence.

Takeaway

Scientists looked at the DNA of different tuberculosis germs and found that they are changing in ways that might help them survive better in humans.

Methodology

Multiple genome alignments were performed using the freeware MAUVE v1.3 and a Perl-based package called islandsanalyser.

Limitations

The study is based on only six strains, which may not represent the entire diversity of Mycobacterium tuberculosis.

Digital Object Identifier (DOI)

10.1186/1756-0500-1-110

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