Integrated mutation, copy number and expression profiling in resectable non-small cell lung cancer
2011

Genetic Profiling in Non-Small Cell Lung Cancer

Sample size: 69 publication Evidence: moderate

Author Information

Author(s): Genni M Newnham, Matthew Conron, SueAnne McLachlan, Alexander Dobrovic, Hongdo Do, Jason Li, Kenneth Opeskin, Natalie Thompson, Gavin M Wright, David M Thomas

Primary Institution: St Vincent's Hospital, Melbourne, Australia

Hypothesis

The study aims to identify critical genes involved in non-small cell lung cancer (NSCLC) pathogenesis.

Conclusion

The results may help identify new predictive biomarkers and targets for novel therapies to improve outcomes for NSCLC patients.

Supporting Evidence

  • Combined analyses identified specific patterns of genetic alteration associated with adenocarcinoma vs. squamous differentiation.
  • Amplification of 3q was associated with mutations in TP53 in adenocarcinoma.
  • A prognostic signature for disease recurrence was validated in an independent test set.

Takeaway

Researchers looked at the genes in lung cancer samples to find out which ones might help doctors treat the disease better.

Methodology

Transcriptional and genomic profiling were performed on 69 resected NSCLC specimens, correlating results with mutational analyses and clinical data.

Limitations

The study size is small, which may limit the strength of the conclusions.

Participant Demographics

{"gender":{"male":42,"female":27},"age":{"median":70,"range":"29 - 85"},"histology":{"adenocarcinoma":30,"squamous cell carcinoma":23,"large cell carcinoma":16},"smoking_status":{"never":16,"current/ex":53}}

Statistical Information

P-Value

p = 0.083

Statistical Significance

p<0.005

Digital Object Identifier (DOI)

10.1186/1471-2407-11-93

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