Functional divergence of the NIP III subgroup proteins involved altered selective constraints and positive selection
2010

Study of NIP III Proteins in Plants

publication Evidence: moderate

Author Information

Author(s): Liu Qingpo, Zhu Zhujun

Primary Institution: Zhejiang A & F University

Hypothesis

Can dicot NIP III proteins transport larger solutes like silicic acid?

Conclusion

The study provides evidence of functional divergence between dicot and monocot NIP2s, driven by positive selection and evolutionary rate shifts.

Supporting Evidence

  • NIP III subgroup proteins have undergone strong selective pressure for adaptive evolution.
  • The divergence time of NIP III subgroup predates the monocot-dicot split.
  • The study identified several Specificity Determining Positions (SDPs) responsible for functional specificity.

Takeaway

This study looks at how certain proteins in plants, called NIP III proteins, have changed over time and how they might work differently in different types of plants.

Methodology

The study used phylogenetic analysis, maximum likelihood analysis, and tests for positive selection to investigate NIP III proteins.

Limitations

The study primarily focuses on specific plant species and may not represent all dicots and monocots.

Statistical Information

P-Value

p<0.01

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1186/1471-2229-10-256

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