RiboaptDB: A Comprehensive Database of Ribozymes and Aptamers
2006

RiboaptDB: A Database for Ribozymes and Aptamers

Sample size: 4212 publication Evidence: moderate

Author Information

Author(s): Thodima Venkata, Pirooznia Mehdi, Deng Youping

Primary Institution: University of Southern Mississippi

Conclusion

The RiboaptDB database serves as a valuable resource for researchers by providing comprehensive information on ribozymes and aptamers, which may have diagnostic or therapeutic applications.

Supporting Evidence

  • The database includes 370 artificial ribozyme sequences and 3842 aptamer sequences.
  • RiboaptDB is updated regularly to include new literature.
  • The database provides a user-friendly interface for searching and submitting data.

Takeaway

RiboaptDB is like a big library where scientists can find special RNA molecules that can help in medicine and technology.

Methodology

The database was constructed using a relational database schema and implemented with MySQL, allowing for user-friendly access and data submission.

Potential Biases

Potential biases may arise from the manual compilation of data from published literature.

Limitations

The database is relatively small and may contain errors due to human input during data collection.

Digital Object Identifier (DOI)

10.1186/1471-2105-7-S2-S6

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