Evaluating genome-wide DNA methylation changes in mice by Methylation Specific Digital Karyotyping
2008

DNA Methylation Changes in Mice Due to Diet

Sample size: 12 publication Evidence: moderate

Author Information

Author(s): Boon Kathy, Tomfohr John K, Bailey Nathaniel W, Garantziotis Stavros, Li Zhuowei, Brass David M, Maruoka Shuichiro, Hollingsworth John W, Schwartz David A

Primary Institution: National Heart Lung and Blood Institute/National Institute of Environmental Health Sciences

Hypothesis

Can Methylation Specific Digital Karyotyping (MSDK) effectively analyze epigenetic changes in mice after perinatal nutritional modifications?

Conclusion

The study found that perinatal dietary changes in methyl-donor content can lead to subtle changes in DNA methylation in mice.

Supporting Evidence

  • The MSDK method identified 158 loci that were significantly differentially methylated after dietary changes.
  • Quantitative PCR confirmed changes in methylation at specific loci.
  • The study demonstrated a correlation between methylation changes and transcription levels.

Takeaway

Mice that ate different diets during pregnancy showed changes in their DNA that could affect how their genes work.

Methodology

The study used Methylation Specific Digital Karyotyping (MSDK) to analyze DNA from lung tissue of mice exposed to different diets.

Limitations

The study's findings may be influenced by the mixed cell population in the samples.

Participant Demographics

C57BL/6J adult male mice were used in the study.

Statistical Information

P-Value

0.05

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1186/1471-2164-9-598

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