Evolutionary genomics of plant genes encoding N-terminal-TM-C2 domain proteins and the similar FAM62 genes and synaptotagmin genes of metazoans
2007

Evolution of Plant and Animal Genes Related to Synaptotagmin

publication Evidence: moderate

Author Information

Author(s): Craxton Molly

Primary Institution: Medical Research Council Laboratory of Molecular Biology

Hypothesis

Understanding the evolutionary relationships among synaptotagmin-like genes in plants and animals will enhance functional studies and genome annotation.

Conclusion

Genes encoding proteins with N-terminal-transmembrane-C2 domain architectures resembling synaptotagmins are widespread in eukaryotes, indicating complex evolutionary relationships.

Supporting Evidence

  • The study identified six groups of conserved plant genes and compared them with animal FAM62 genes.
  • Evidence of RNA editing and alternative splicing was found in the analyzed genes.
  • The research provides a resource for studies of intron evolution and gene family classification.

Takeaway

This study looks at how certain genes in plants and animals are similar and how they have changed over time. It helps us understand their functions better.

Methodology

The study involved collecting and comparing plant Syt-like sequences and metazoan FAM62 sequences from primary nucleotide databases, analyzing intron patterns, and classifying gene families.

Limitations

The study relies on fragmentary sequences and incomplete genome annotations, which may limit the conclusions about the total gene complement of organisms.

Digital Object Identifier (DOI)

10.1186/1471-2164-8-259

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