Distribution of ancestral proto-Actinopterygian chromosome arms within the genomes of 4R-derivative salmonid fishes (Rainbow trout and Atlantic salmon)
2008

Chromosome Organization in Salmonid Fishes

publication Evidence: moderate

Author Information

Author(s): Danzmann Roy G, Davidson Evelyn A, Ferguson Moira M, Gharbi Karim, Koop Ben F, Hoyheim Bjorn, Lien Sigbjorn, Lubieniecki Krzysztof P, Moghadam Hooman K, Park Jay, Phillips Ruth B, Davidson William S

Primary Institution: Department of Integrative Biology, University of Guelph

Hypothesis

The study investigates the organization of ancestral proto-Actinopterygian chromosome arms in salmonid fishes.

Conclusion

The findings suggest that a 12 proto-linkage group arrangement may have occurred in basal soft-rayed fishes, rather than a 13 proto-linkage group model.

Supporting Evidence

  • Salmonids retain a large amount of duplicate gene expression within their genome.
  • Evidence for retention of large whole-arm affinities between ancestral linkage groups was found.
  • Comparative synteny analyses may help identify important genes in salmonid fishes.

Takeaway

This study looks at how the chromosomes of salmon, like rainbow trout and Atlantic salmon, are organized and how they relate to ancient fish ancestors.

Methodology

Comparative genomic analysis of chromosome organization and synteny in salmonid fishes.

Limitations

The study may not account for all genomic rearrangements and complexities in salmonid chromosomes.

Digital Object Identifier (DOI)

10.1186/1471-2164-9-557

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