Patterns of population differentiation of candidate genes for cardiovascular disease
2007

Genetic Differences in Cardiovascular Disease Risk Among Ethnic Groups

Sample size: 90 publication 10 minutes Evidence: moderate

Author Information

Author(s): Kullo Iftikhar J, Ding Keyue

Primary Institution: Mayo Clinic, Rochester MN, USA

Hypothesis

Putatively functional SNPs in genes related to cardiovascular disease will show greater population differentiation than non-functional SNPs.

Conclusion

The study suggests that genetic factors contribute to varying susceptibility to cardiovascular disease among different ethnic groups.

Supporting Evidence

  • Mean FST values for common putatively functional variants were significantly higher than for non-functional variants.
  • Significant variation in FST was noted among biological processes related to cardiovascular disease.
  • Genes in the 'apoptosis' and 'lipoprotein metabolism' pathways showed an excess of high FST values.

Takeaway

Different groups of people can have different chances of getting heart disease because of their genes. This study looked at how these genes differ between groups.

Methodology

The study analyzed genotype data from the HapMap database for three populations and calculated FST values for SNPs in candidate genes related to cardiovascular disease.

Potential Biases

Potential ascertainment bias due to focusing on SNPs with MAF ≥ 0.10.

Limitations

The study cannot identify genes subject to natural selection before the last ~75,000 years and may be affected by sample size and ascertainment bias.

Participant Demographics

Participants included Yoruba in Nigeria, Utah residents with European ancestry, and Han Chinese + Japanese.

Statistical Information

P-Value

p<10-16

Statistical Significance

p<10-16

Digital Object Identifier (DOI)

10.1186/1471-2156-8-48

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