SHH1, a Homeodomain Protein Required for DNA Methylation, As Well As RDR2, RDM4, and Chromatin Remodeling Factors, Associate with RNA Polymerase IV
2011

SHH1 and Its Role in DNA Methylation in Arabidopsis

publication Evidence: high

Author Information

Author(s): Law Julie A., Vashisht Ajay A., Wohlschlegel James A., Jacobsen Steven E.

Primary Institution: University of California Los Angeles

Hypothesis

The study investigates the role of the homeodomain protein SHH1 in DNA methylation and its interaction with RNA Polymerase IV in Arabidopsis.

Conclusion

SHH1 is essential for both de novo and maintenance DNA methylation in Arabidopsis, and it is required for the accumulation of siRNAs at specific loci.

Supporting Evidence

  • SHH1 is required for the accumulation of siRNAs at specific loci.
  • Mutations in SHH1 lead to decreased DNA methylation at loci controlled by the RdDM pathway.
  • Affinity purification revealed that SHH1 co-purifies with RNA Polymerase IV.

Takeaway

SHH1 is a protein that helps plants keep their DNA properly marked, which is important for how genes are turned on and off.

Methodology

The study used affinity purification and mass spectrometry to identify proteins associated with RNA Polymerase IV and assessed DNA methylation levels in various mutant lines.

Digital Object Identifier (DOI)

10.1371/journal.pgen.1002195

Want to read the original?

Access the complete publication on the publisher's website

View Original Publication